spacer
spacer

Ligand clusters for UniProt code P69910

Ligand clusters for P69910: Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1

Top 6 (of 15) ligand clusters
Cluster 1.
6 ligand types
10 ligands
Cluster 2.
5 ligand types
8 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1pmoA  
 

Structures

PDB   Schematic diagram
1pmoA    
3fz7A    
3fz8A    
3fz6A    
2dgkA    
 more ...

 

 Cluster 1 contains 6 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ACY × 2
Acetic acid
PDB codes: 1pmm(A), 2dgl(A).


 
2. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 1pmo(A).


 
3. Ligand: PLP × 4
Pyridoxal-5'-Phosphate
PDB codes: 1pmm(A), 2dgk(A), 2dgl(A), 2dgm(A).


 
4. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 3fz8(A).


 
5. Ligand: PMP × 1
4'-Deoxy-4'-Aminopyridoxal-5'-Phosphate
PDB code: 3fz6(A).


 
6. Ligand: PO4 × 1
Phosphate ion
PDB code: 3fz7(A).

 

 Cluster 2 contains 5 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 1pmo(A).


 
2. Ligand: PLP × 4
Pyridoxal-5'-Phosphate
PDB codes: 1pmm(A), 2dgk(A), 2dgl(A), 2dgm(A).


 
3. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 3fz8(A).


 
4. Ligand: PMP × 1
4'-Deoxy-4'-Aminopyridoxal-5'-Phosphate
PDB code: 3fz6(A).


 
5. Ligand: PO4 × 1
Phosphate ion
PDB code: 3fz7(A).

 

 Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: TRS × 1
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1pmo(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: TRS × 1
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1pmo(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: TRS × 2
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1pmo(A),

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: TRS × 1
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1pmo(A).

 

spacer

spacer