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PDBsum entry 2da0

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Tunnel analysis for: 2da0 calculated with MOLE 2.0 PDB id
2da0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.33 21.8 1.62 0.52 7.8 65 1 1 1 6 2 0 0  
2 1.15 1.33 21.9 1.66 0.47 8.0 65 1 1 1 6 2 0 1  
3 1.17 1.68 24.3 2.07 0.62 4.3 58 1 0 1 6 2 0 1  
4 1.17 1.68 24.4 2.11 0.58 4.4 59 1 0 1 6 2 0 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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