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PDBsum entry 2d9f

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Tunnel analysis for: 2d9f calculated with MOLE 2.0 PDB id
2d9f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.03 7.5 -0.83 -0.38 16.5 79 1 1 1 2 0 1 0  
2 3.16 9.9 -0.35 -0.13 10.8 70 2 0 1 1 1 2 0  
3 3.04 11.7 -0.11 -0.13 7.8 69 1 0 1 1 1 2 0  
4 1.39 5.2 0.84 0.08 1.1 87 0 0 1 3 0 1 0  
5 2.67 3.8 1.17 0.39 1.1 78 0 0 0 3 1 1 0  
6 1.26 5.7 -2.63 -0.26 30.1 84 2 0 1 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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