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PDBsum entry 2d6f
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Tunnel analysis for: 2d6f calculated with  MOLE 2.0
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PDB id
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2d6f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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15 tunnels,
coloured by tunnel radius |
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15 tunnels,
coloured by
tunnel radius
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15 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.29 |
1.51 |
37.3 |
-1.24 |
-0.44 |
17.3 |
83 |
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6 |
3 |
3 |
5 |
0 |
2 |
1 |
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2 |
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1.40 |
2.87 |
42.4 |
-1.27 |
-0.29 |
18.8 |
80 |
5 |
6 |
2 |
5 |
1 |
3 |
1 |
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3 |
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1.30 |
1.51 |
43.6 |
-1.74 |
-0.54 |
19.8 |
84 |
7 |
6 |
6 |
3 |
0 |
2 |
1 |
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4 |
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1.09 |
2.58 |
39.9 |
-1.10 |
-0.35 |
18.7 |
82 |
5 |
3 |
3 |
6 |
0 |
2 |
1 |
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5 |
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1.23 |
1.25 |
42.6 |
-1.35 |
-0.34 |
20.9 |
81 |
6 |
6 |
2 |
4 |
1 |
2 |
1 |
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6 |
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1.06 |
2.58 |
45.5 |
-1.64 |
-0.41 |
24.1 |
81 |
7 |
3 |
3 |
6 |
0 |
0 |
1 |
A 973 E
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7 |
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1.07 |
2.67 |
67.5 |
-1.65 |
-0.51 |
22.8 |
82 |
8 |
9 |
5 |
5 |
0 |
2 |
1 |
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8 |
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1.24 |
1.24 |
15.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 909 F C 923 F C 924 F U 925 F G 942 F G 943 F G
945 F
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9 |
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2.73 |
2.73 |
15.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 923 E C 924 E U 925 E G 926 E C 927 E C 941 E G
942 E G 943 E G 945 E
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10 |
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1.37 |
1.37 |
16.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 909 E C 923 E C 924 E U 925 E C 941 E G 942 E G
943 E G 945 E
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11 |
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2.75 |
2.75 |
18.6 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 924 E U 925 E G 926 E C 927 E U 928 E G 929 E G
937 E A 938 E C 939 E C 940 E G 942 E G 943 E
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12 |
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2.77 |
2.77 |
21.2 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 924 E U 925 E G 926 E C 927 E U 928 E G 929 E G
930 E G 931 E U 933 E G 937 E A 938 E C 939 E C
940 E G 942 E G 943 E
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13 |
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1.36 |
1.36 |
27.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 909 E C 923 E C 924 E U 925 E G 926 E C 927 E U
928 E G 929 E G 937 E A 938 E C 939 E C 940 E G
942 E G 943 E G 945 E
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14 |
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1.38 |
1.38 |
30.0 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 909 E C 923 E C 924 E U 925 E G 926 E C 927 E U
928 E G 929 E G 930 E G 931 E U 933 E G 937 E A
938 E C 939 E C 940 E G 942 E G 943 E G 945 E
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15 |
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1.10 |
1.09 |
26.4 |
-1.49 |
-0.52 |
11.3 |
78 |
3 |
2 |
1 |
0 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program