PDBsum entry 2d3w Go to PDB code:  Pore analysis for: 2d3w calculated with MOLE 2.0 PDB id 2d3w Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.04 2.37 26.1 -2.10 -0.57 25.8 91 5 3 4 1 1 0 0   2 2.02 2.37 27.2 -1.47 -0.37 17.5 92 2 3 5 2 1 0 0   3 2.02 2.37 28.1 -2.00 -0.69 22.8 90 5 3 4 1 1 0 0   4 3.84 4.00 28.5 -1.41 -0.66 17.7 88 2 4 6 1 1 1 0   5 3.33 3.69 30.9 -2.10 -0.42 22.5 88 4 1 5 1 2 1 0   6 1.72 1.72 31.9 -1.76 -0.50 21.8 81 3 5 3 1 2 0 0   7 3.22 3.56 34.0 -2.08 -0.54 18.9 83 4 1 5 1 3 1 0   8 1.15 1.15 43.0 -1.08 -0.33 19.8 74 3 4 3 3 2 2 0   9 3.33 3.70 47.8 -1.77 -0.51 21.3 88 5 5 8 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.