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PDBsum entry 2d10

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2d10 calculated with MOLE 2.0 PDB id
2d10
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.20 3.20 30.2 -2.38 -0.44 28.8 73 6 3 1 2 2 0 0  
2 1.45 1.63 31.8 -0.35 -0.26 5.7 82 1 2 3 2 2 0 0  
3 2.46 2.54 39.3 -2.20 -0.40 27.6 74 7 4 2 2 3 0 0  
4 1.78 5.24 50.3 -2.55 -0.53 36.2 81 9 7 2 4 0 0 0  
5 2.48 4.85 57.7 -2.52 -0.45 36.0 77 9 8 1 6 1 0 0  
6 2.08 5.03 63.3 -2.51 -0.44 36.2 77 10 10 1 6 1 0 0  
7 2.41 4.94 70.2 -2.72 -0.47 36.5 79 13 10 3 6 2 0 0  
8 2.04 2.04 73.2 -2.73 -0.53 33.9 80 11 9 6 3 2 1 0  
9 1.87 2.86 99.2 -2.40 -0.54 27.6 82 12 10 8 3 2 1 0  
10 2.35 4.72 126.7 -2.45 -0.50 30.5 80 16 13 6 8 2 0 0  
11 1.43 1.46 28.1 -0.64 -0.25 7.9 82 1 1 3 2 2 0 0  
12 1.34 1.42 33.6 -1.14 -0.11 16.4 81 5 2 3 3 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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