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PDBsum entry 2d10
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Pore analysis for: 2d10 calculated with MOLE 2.0
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PDB id
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2d10
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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12 pores,
coloured by radius
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12 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.20 |
3.20 |
30.2 |
-2.38 |
-0.44 |
28.8 |
73 |
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6 |
3 |
1 |
2 |
2 |
0 |
0 |
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2 |
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1.45 |
1.63 |
31.8 |
-0.35 |
-0.26 |
5.7 |
82 |
1 |
2 |
3 |
2 |
2 |
0 |
0 |
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3 |
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2.46 |
2.54 |
39.3 |
-2.20 |
-0.40 |
27.6 |
74 |
7 |
4 |
2 |
2 |
3 |
0 |
0 |
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4 |
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1.78 |
5.24 |
50.3 |
-2.55 |
-0.53 |
36.2 |
81 |
9 |
7 |
2 |
4 |
0 |
0 |
0 |
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5 |
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2.48 |
4.85 |
57.7 |
-2.52 |
-0.45 |
36.0 |
77 |
9 |
8 |
1 |
6 |
1 |
0 |
0 |
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6 |
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2.08 |
5.03 |
63.3 |
-2.51 |
-0.44 |
36.2 |
77 |
10 |
10 |
1 |
6 |
1 |
0 |
0 |
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7 |
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2.41 |
4.94 |
70.2 |
-2.72 |
-0.47 |
36.5 |
79 |
13 |
10 |
3 |
6 |
2 |
0 |
0 |
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8 |
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2.04 |
2.04 |
73.2 |
-2.73 |
-0.53 |
33.9 |
80 |
11 |
9 |
6 |
3 |
2 |
1 |
0 |
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9 |
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1.87 |
2.86 |
99.2 |
-2.40 |
-0.54 |
27.6 |
82 |
12 |
10 |
8 |
3 |
2 |
1 |
0 |
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10 |
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2.35 |
4.72 |
126.7 |
-2.45 |
-0.50 |
30.5 |
80 |
16 |
13 |
6 |
8 |
2 |
0 |
0 |
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11 |
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1.43 |
1.46 |
28.1 |
-0.64 |
-0.25 |
7.9 |
82 |
1 |
1 |
3 |
2 |
2 |
0 |
0 |
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12 |
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1.34 |
1.42 |
33.6 |
-1.14 |
-0.11 |
16.4 |
81 |
5 |
2 |
3 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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