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PDBsum entry 2ct8
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Pore analysis for: 2ct8 calculated with  MOLE 2.0
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PDB id
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2ct8
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.38 |
3.57 |
34.6 |
-1.62 |
-0.56 |
10.9 |
74 |
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2 |
1 |
2 |
0 |
2 |
0 |
0 |
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G 5 C C 6 C G 10 C C 11 C U 12 C C 13 C A 14 C G
15 C C 16 C G 26 C G 27 C A 38 C C 68 C C 69 C
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2 |
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2.72 |
3.15 |
34.7 |
-1.50 |
-0.55 |
10.0 |
74 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 5 D C 6 D G 7 D U 8 D C 11 D U 12 D C 13 D A 14
D G 15 D C 16 D U 47 D G 67 D C 68 D C 69 D
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3 |
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3.13 |
3.38 |
40.3 |
-1.79 |
-0.56 |
14.2 |
73 |
3 |
2 |
2 |
0 |
3 |
0 |
0 |
G 5 C C 13 C A 14 C G 15 C C 16 C C 69 C G 70 C C
71 C
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4 |
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3.39 |
3.45 |
50.0 |
-1.20 |
-0.75 |
10.1 |
69 |
2 |
0 |
1 |
0 |
1 |
0 |
0 |
G 1 C G 2 C C 3 C G 4 C G 5 C C 6 C G 10 C C 11 C
U 12 C C 13 C A 14 C G 26 C G 27 C A 38 C C 68 C
C 69 C A 73 C
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5 |
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1.13 |
1.13 |
56.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 20 C i:A A 21 C G 22 C A 23 C G 24 C C 25 C G
26 C G 27 C G 28 C G 29 C A 38 C G 39 C U 40 C C
41 C C 42 C C 43 C A 44 C G 45 C G 46 C
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6 |
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2.53 |
2.71 |
64.6 |
-0.88 |
-0.44 |
19.3 |
79 |
3 |
4 |
1 |
4 |
0 |
0 |
0 |
A 14 D G 15 D C 16 D C 20 D i:A G 22 D A 23 D G
24 D C 25 D G 26 D G 27 D G 28 D G 29 D A 38 D G
39 D U 40 D C 41 D C 42 D
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7 |
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2.54 |
2.72 |
66.8 |
-1.19 |
-0.42 |
23.5 |
81 |
3 |
6 |
1 |
4 |
0 |
0 |
0 |
G 7 D G 10 D C 11 D U 12 D G 26 D G 27 D U 47 D G
67 D C 68 D C 69 D
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8 |
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1.84 |
2.02 |
123.1 |
-1.74 |
-0.29 |
27.9 |
80 |
10 |
7 |
3 |
4 |
1 |
0 |
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MSP 1501 B G 26 C G 27 C A 38 C G 7 D C 11 D U 12
D U 47 D G 67 D C 68 D C 69 D G 70 D C 71 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program