 |
PDBsum entry 2chv
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2chv calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2chv
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
25 pores,
coloured by radius |
|
25 pores,
coloured by radius
|
25 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.34 |
2.78 |
29.0 |
-2.50 |
-0.50 |
22.6 |
76 |
|
4 |
4 |
2 |
0 |
0 |
4 |
0 |
|
|
 |
|
2 |
 |
2.81 |
4.18 |
35.8 |
-1.41 |
-0.24 |
16.5 |
80 |
5 |
4 |
2 |
4 |
1 |
4 |
0 |
|
|
3 |
 |
2.16 |
2.66 |
38.4 |
-2.23 |
-0.55 |
24.2 |
84 |
5 |
3 |
3 |
2 |
0 |
3 |
0 |
|
|
4 |
 |
2.03 |
3.62 |
41.5 |
-1.84 |
-0.49 |
25.0 |
87 |
5 |
5 |
2 |
6 |
0 |
2 |
0 |
|
|
5 |
 |
2.10 |
2.09 |
51.4 |
-1.65 |
-0.56 |
18.8 |
85 |
5 |
4 |
3 |
6 |
0 |
4 |
0 |
|
|
6 |
 |
2.02 |
3.63 |
58.3 |
-1.83 |
-0.26 |
22.1 |
80 |
8 |
7 |
3 |
5 |
1 |
5 |
0 |
|
|
7 |
 |
1.67 |
1.70 |
58.1 |
-0.27 |
0.04 |
20.1 |
84 |
5 |
4 |
1 |
7 |
1 |
1 |
0 |
|
|
8 |
 |
2.56 |
2.92 |
60.1 |
-2.21 |
-0.67 |
22.3 |
84 |
6 |
5 |
3 |
3 |
0 |
3 |
0 |
|
|
9 |
 |
1.42 |
1.92 |
62.3 |
-1.76 |
-0.53 |
21.9 |
80 |
7 |
4 |
2 |
2 |
0 |
3 |
0 |
|
|
10 |
 |
1.43 |
1.65 |
63.0 |
-1.54 |
-0.40 |
21.8 |
84 |
6 |
4 |
4 |
6 |
0 |
3 |
0 |
|
|
11 |
 |
1.75 |
2.01 |
70.5 |
-1.89 |
-0.46 |
21.7 |
86 |
5 |
6 |
4 |
4 |
1 |
2 |
0 |
|
|
12 |
|
1.68 |
1.68 |
71.3 |
-1.36 |
-0.25 |
20.4 |
83 |
9 |
7 |
4 |
7 |
1 |
4 |
0 |
|
|
13 |
|
1.93 |
2.17 |
73.0 |
-1.55 |
-0.37 |
20.7 |
84 |
5 |
6 |
3 |
4 |
2 |
3 |
0 |
|
|
14 |
|
2.20 |
2.81 |
75.1 |
-1.79 |
-0.43 |
23.2 |
85 |
8 |
8 |
5 |
6 |
0 |
5 |
0 |
|
|
15 |
|
2.12 |
3.63 |
82.1 |
-2.11 |
-0.51 |
25.8 |
85 |
10 |
9 |
5 |
7 |
0 |
5 |
0 |
|
|
16 |
|
1.61 |
1.75 |
87.5 |
-0.71 |
-0.02 |
22.2 |
86 |
8 |
4 |
2 |
8 |
1 |
0 |
0 |
|
|
17 |
|
2.60 |
2.92 |
88.2 |
-2.18 |
-0.49 |
24.0 |
84 |
11 |
9 |
6 |
6 |
1 |
5 |
0 |
|
|
18 |
|
1.74 |
1.99 |
98.7 |
-2.03 |
-0.63 |
24.1 |
87 |
6 |
9 |
5 |
4 |
1 |
2 |
0 |
|
|
19 |
|
2.60 |
3.60 |
98.1 |
-1.62 |
-0.42 |
19.6 |
83 |
7 |
8 |
4 |
6 |
1 |
6 |
0 |
|
|
20 |
|
2.51 |
3.73 |
101.2 |
-1.73 |
-0.37 |
26.9 |
87 |
9 |
9 |
5 |
9 |
0 |
5 |
0 |
|
|
21 |
|
2.73 |
3.88 |
105.7 |
-1.56 |
-0.44 |
20.2 |
86 |
9 |
11 |
5 |
8 |
0 |
4 |
0 |
|
|
22 |
|
2.21 |
4.40 |
115.0 |
-1.83 |
-0.43 |
23.5 |
86 |
11 |
12 |
6 |
11 |
1 |
4 |
0 |
|
|
23 |
|
1.48 |
2.97 |
116.6 |
-1.19 |
-0.32 |
17.7 |
85 |
9 |
11 |
5 |
12 |
1 |
4 |
0 |
|
|
24 |
|
2.51 |
3.72 |
117.9 |
-1.82 |
-0.45 |
23.8 |
85 |
11 |
12 |
6 |
9 |
0 |
5 |
0 |
|
 |
25 |
|
2.44 |
2.63 |
120.5 |
-1.65 |
-0.41 |
23.8 |
84 |
11 |
12 |
5 |
9 |
1 |
6 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program