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PDBsum entry 2cfm

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Tunnel analysis for: 2cfm calculated with MOLE 2.0 PDB id
2cfm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.67 28.0 -2.69 -0.49 36.7 74 6 7 1 1 3 0 0  401 MSE A,1562 MG A,1563 AMP A
2 2.51 5.1 -0.08 0.11 19.9 77 1 2 0 1 0 1 0  
3 2.50 7.5 -0.30 0.00 13.3 77 1 2 0 1 0 1 0  
4 1.48 12.7 -2.44 -0.61 27.4 76 4 1 2 1 0 0 0  
5 1.31 7.4 -1.02 -0.60 13.5 68 1 0 0 1 0 1 0  
6 2.28 4.4 0.02 -0.42 9.7 92 0 1 1 4 0 0 0  
7 1.47 13.4 -0.23 -0.43 9.0 83 1 0 0 2 1 1 0  240 MSE A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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