 |
PDBsum entry 2c7n
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2c7n calculated with MOLE 2.0
|
PDB id
|
|
|
|
2c7n
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
13 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.49 |
1.57 |
25.6 |
-1.07 |
-0.07 |
10.6 |
83 |
 |
3 |
0 |
5 |
3 |
4 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.86 |
3.95 |
48.5 |
-1.75 |
0.18 |
19.1 |
68 |
4 |
1 |
4 |
1 |
6 |
0 |
1 |
|
 |
3 |
 |
1.51 |
1.71 |
63.8 |
-1.40 |
-0.29 |
17.7 |
79 |
8 |
2 |
3 |
3 |
4 |
0 |
0 |
|
 |
4 |
 |
1.51 |
1.71 |
66.1 |
-1.87 |
-0.44 |
24.6 |
72 |
5 |
3 |
0 |
2 |
3 |
0 |
0 |
|
 |
5 |
 |
1.97 |
2.87 |
75.4 |
-1.40 |
-0.27 |
17.4 |
76 |
7 |
3 |
3 |
3 |
4 |
3 |
0 |
|
 |
6 |
 |
2.34 |
2.83 |
77.0 |
-1.47 |
-0.21 |
18.8 |
73 |
6 |
3 |
4 |
3 |
4 |
3 |
1 |
|
 |
7 |
 |
1.53 |
1.58 |
84.9 |
-1.37 |
-0.39 |
17.3 |
78 |
7 |
4 |
3 |
5 |
2 |
3 |
0 |
|
 |
8 |
 |
1.77 |
2.83 |
87.7 |
-1.42 |
0.10 |
14.3 |
69 |
10 |
1 |
7 |
6 |
12 |
3 |
0 |
|
 |
9 |
 |
1.75 |
3.54 |
94.3 |
-1.40 |
-0.06 |
17.8 |
73 |
13 |
2 |
4 |
5 |
9 |
3 |
0 |
|
 |
10 |
 |
1.70 |
3.12 |
95.9 |
-1.31 |
0.00 |
17.5 |
71 |
12 |
2 |
5 |
5 |
9 |
3 |
1 |
|
 |
11 |
 |
1.63 |
1.58 |
96.1 |
-1.28 |
-0.03 |
12.6 |
75 |
10 |
3 |
11 |
8 |
10 |
3 |
0 |
|
 |
12 |
 |
1.64 |
1.62 |
96.6 |
-1.28 |
-0.10 |
16.2 |
76 |
12 |
2 |
8 |
6 |
8 |
3 |
0 |
|
 |
13 |
 |
1.31 |
1.31 |
25.8 |
-2.26 |
-0.54 |
20.1 |
83 |
4 |
0 |
4 |
0 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |