spacer
spacer

PDBsum entry 2c4f

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
2c4f
Contents
Protein chains
254 a.a.
139 a.a.
75 a.a.
116 a.a.
Ligands
GIL
GLC
FUC
NAG
Metals
_CA ×5
Waters ×328

References listed in PDB file
Key reference
Title The discovery of fluoropyridine-Based inhibitors of the factor viia/tf complex--Part 2.
Authors J.T.Kohrt, K.J.Filipski, W.L.Cody, C.Cai, D.A.Dudley, C.A.Van huis, J.A.Willardsen, L.S.Narasimhan, E.Zhang, S.T.Rapundalo, K.Saiya-Cork, R.J.Leadley, J.J.Edmunds.
Ref. Bioorg Med Chem Lett, 2006, 16, 1060-1064. [DOI no: 10.1016/j.bmcl.2005.10.076]
PubMed id 16289811
Abstract
The activated factor VII/tissue factor complex (FVIIa/TF) is known to play a key role in the formation of blood clots. Inhibition of this complex may lead to new antithrombotic drugs. A fluoropyridine-based series of FVIIa/TF inhibitors was discovered which utilized a diisopropylamino group for binding in the S2 and S3 binding pockets of the active site of the enzyme complex. In this series, an enhancement in binding affinity was observed by substitution at the 5-position of the hydroxybenzoic acid sidechain. An X-ray crystal structure indicates that amides at this position may increase inhibitor binding affinity through interactions with the S1'/S2' pocket.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer