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PDBsum entry 2c3d
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Tunnel analysis for: 2c3d calculated with  MOLE 2.0
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PDB id
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2c3d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
1.78 |
27.2 |
0.30 |
-0.07 |
3.5 |
81 |
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1 |
0 |
1 |
7 |
2 |
2 |
0 |
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COM 1525 A COM 1525 B
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2 |
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1.14 |
1.73 |
27.4 |
0.66 |
0.05 |
4.8 |
79 |
1 |
0 |
1 |
9 |
2 |
1 |
0 |
COM 1525 B
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3 |
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1.14 |
1.74 |
30.5 |
0.64 |
0.13 |
5.1 |
76 |
2 |
0 |
2 |
9 |
3 |
2 |
0 |
COM 1525 A COM 1525 B
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4 |
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1.07 |
1.27 |
43.8 |
0.04 |
0.04 |
13.0 |
80 |
5 |
3 |
3 |
10 |
1 |
1 |
2 |
FAD 1524 A COM 1525 A COM 1525 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program