spacer
spacer

PDBsum entry 2c16

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2c16 calculated with MOLE 2.0 PDB id
2c16
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.33 17.4 -1.04 -0.63 18.6 85 0 3 0 4 1 0 0  MG 1336 A PEG 1339 A
2 1.54 1.54 22.9 -0.64 -0.45 12.8 87 1 2 1 5 0 1 0  MG 1336 A
3 1.33 1.33 16.7 -1.17 -0.65 19.9 85 0 3 0 4 1 0 0  MG 1336 B PEG 1338 B
4 1.53 1.53 22.8 -0.69 -0.46 14.5 87 1 2 1 5 0 1 0  MG 1336 B
5 1.22 1.47 15.7 0.92 0.17 7.2 71 1 1 1 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer