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PDBsum entry 2c0m

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Pore analysis for: 2c0m calculated with MOLE 2.0 PDB id
2c0m
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 2.75 37.0 -1.22 -0.09 13.2 90 3 2 8 6 3 0 0  
2 1.62 1.81 41.9 -1.18 -0.13 12.2 89 4 2 8 7 4 0 0  
3 2.17 2.45 46.6 -1.33 -0.53 4.7 83 2 1 8 3 2 1 0  
4 2.23 2.47 47.3 -1.78 -0.43 15.1 74 4 2 3 1 2 1 0  
5 2.17 2.44 49.7 -1.34 -0.33 7.7 75 3 3 3 1 2 2 0  
6 1.62 1.81 50.6 -1.76 -0.48 14.1 89 3 4 11 3 3 0 0  
7 2.46 2.88 50.9 -1.28 -0.45 10.8 82 3 4 5 3 0 2 0  
8 1.47 1.67 56.3 -1.81 -0.45 17.4 85 4 3 7 3 2 1 0  
9 2.21 2.62 58.0 -1.38 -0.53 12.6 83 4 3 6 4 0 1 0  
10 2.44 2.58 58.3 -1.20 -0.58 12.0 83 4 3 6 5 0 1 0  
11 2.25 2.48 73.9 -1.23 -0.56 9.3 84 2 3 10 4 2 1 0  
12 1.75 2.95 75.4 -1.45 -0.36 17.8 83 6 6 8 8 3 1 0  
13 2.43 2.58 75.4 -1.30 -0.57 15.0 84 4 5 7 5 0 1 0  
14 1.62 1.81 78.0 -1.63 -0.40 15.4 81 3 4 11 4 5 1 0  
15 1.61 1.81 79.6 -1.72 -0.39 21.6 82 5 6 8 5 3 1 0  
16 1.69 3.40 82.2 -1.26 -0.30 19.9 83 6 5 7 7 1 1 0  
17 2.24 2.47 90.6 -1.42 -0.51 14.8 78 5 4 8 6 2 2 0  
18 2.28 2.62 116.7 -1.34 -0.56 14.0 82 6 6 11 9 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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