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PDBsum entry 2bz6

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
2bz6

 

 

 

 

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Contents
Protein chains
254 a.a. *
53 a.a. *
Ligands
346
SO4
Metals
_CA
Waters ×500
* Residue conservation analysis
PDB id:
2bz6
Name: Hydrolase
Title: Orally available factor7a inhibitor
Structure: Blood coagulation factor viia. Chain: h. Fragment: factor vii heavy chain, residues 213-466. Synonym: serum prothrombin conversion accelerator, spca, proconvertin, eptacog alfa, novoseven. Engineered: yes. Blood coagulation factor viia. Chain: l. Fragment: factor vii light chain, residues 150-202.
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562
Biol. unit: Dimer (from PQS)
Resolution:
1.60Å     R-factor:   0.168     R-free:   0.193
Authors: K.Groebke-Zbinden,U.Obst-Sander,K.Hilpert,H.Kuehne,D.W.Banner, H.J.Boehm,M.Stahl,J.Ackermann,L.Alig,L.Weber,H.P.Wessel, M.A.Riederer,T.B.Tschopp,T.Lave
Key ref: K.Groebke Zbinden et al. (2006). Dose-dependent antithrombotic activity of an orally active tissue factor/factor VIIa inhibitor without concomitant enhancement of bleeding propensity. Bioorg Med Chem Lett, 14, 5357-5369. PubMed id: 16621574
Date:
11-Aug-05     Release date:   22-Feb-06    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08709  (FA7_HUMAN) -  Coagulation factor VII from Homo sapiens
Seq:
Struc:
466 a.a.
254 a.a.
Protein chain
Pfam   ArchSchema ?
P08709  (FA7_HUMAN) -  Coagulation factor VII from Homo sapiens
Seq:
Struc:
466 a.a.
53 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains H, L: E.C.3.4.21.21  - coagulation factor VIIa.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolyzes one Arg-|-Ile bond in factor X to form factor Xa.

 

 
Bioorg Med Chem Lett 14:5357-5369 (2006)
PubMed id: 16621574  
 
 
Dose-dependent antithrombotic activity of an orally active tissue factor/factor VIIa inhibitor without concomitant enhancement of bleeding propensity.
K.Groebke Zbinden, D.W.Banner, K.Hilpert, J.Himber, T.Lavé, M.A.Riederer, M.Stahl, T.B.Tschopp, U.Obst-Sander.
 
  ABSTRACT  
 
The discovery of a highly potent and selective tissue factor/factor VIIa inhibitor is described. Upon oral administration of its double prodrug in the guinea pig, a dose-dependent antithrombotic effect is observed in an established model of arterial thrombosis without prolonging bleeding time. The pharmacodynamic properties of this selective inhibitor are compared to the behaviour of a mixed factor VIIa/factor Xa inhibitor.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20045964 T.Shiraishi, S.Kadono, M.Haramura, H.Kodama, Y.Ono, H.Iikura, T.Esaki, T.Koga, K.Hattori, Y.Watanabe, A.Sakamoto, K.Yoshihashi, T.Kitazawa, K.Esaki, M.Ohta, H.Sato, and T.Kozono (2010).
Design and synthesis of peptidomimetic factor VIIa inhibitors.
  Chem Pharm Bull (Tokyo), 58, 38-44.
PDB code: 2zzu
18493021 V.Chandrasekaran, C.J.Lee, R.E.Duke, L.Perera, and L.G.Pedersen (2008).
Computational study of the putative active form of protein Z (PZa): sequence design and structural modeling.
  Protein Sci, 17, 1354-1361.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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