PDBsum entry 2byv Go to PDB code:  Tunnel analysis for: 2byv calculated with MOLE 2.0 PDB id 2byv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 2.56 26.3 0.49 0.08 7.1 71 2 1 1 4 3 1 1   2 1.18 2.55 42.5 -0.33 -0.08 19.2 73 5 4 0 6 2 0 1   3 1.29 1.29 25.1 0.38 -0.13 7.9 77 1 1 0 5 1 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.