spacer
spacer

PDBsum entry 2bxe

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 2bxe calculated with MOLE 2.0 PDB id
2bxe
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.53 27.3 1.10 0.28 6.4 73 1 2 0 3 3 0 1  
2 2.05 2.14 46.3 -0.47 0.14 20.9 78 8 4 2 11 1 0 1  1FL 2002 B
3 1.22 1.40 29.7 0.55 0.40 12.1 70 3 1 1 4 4 0 3  
4 1.26 1.27 43.8 0.08 0.27 14.7 79 3 2 2 9 1 1 0  1FL 2002 A
5 1.58 2.21 52.1 -0.90 0.02 24.5 79 6 5 3 9 2 0 1  1FL 2002 A
6 1.22 1.40 57.6 -1.25 -0.11 25.3 79 9 6 1 5 3 0 0  
7 1.45 1.94 61.1 -0.69 -0.03 22.6 76 8 5 1 5 3 0 3  
8 1.16 1.38 76.5 -0.48 0.00 19.1 76 8 4 1 9 4 1 3  
9 1.80 2.59 79.6 -2.34 -0.35 26.6 83 8 5 6 4 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer