PDBsum entry 2bq3 Go to PDB code:  Tunnel analysis for: 2bq3 calculated with MOLE 2.0 PDB id 2bq3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.89 24.4 -1.35 -0.13 26.8 94 4 0 2 2 0 0 0  DG 5 P DG 9 P DA 10 P DA 7 T DA 8 T DT 9 T DC 10 T 2 1.62 1.83 26.1 1.72 0.80 12.3 89 2 0 0 5 0 0 0  DT 11 P DT 12 P DC 13 P DG 6 T DA 7 T 3 1.62 1.83 26.4 1.30 0.68 12.2 89 2 0 1 4 0 0 0  DT 12 P DC 13 P DC 2 T DT 4 T DG 6 T DA 7 T 4 1.64 1.83 28.4 1.26 0.51 11.1 93 3 0 0 6 0 0 0  DT 4 T GNE 5 T DG 6 T DA 7 T 5 1.66 1.88 42.2 -0.20 0.12 14.9 92 4 0 3 6 1 0 0  DA 14 P DT 4 T GNE 5 T DG 6 T DA 7 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.