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PDBsum entry 2bki

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2bki calculated with MOLE 2.0 PDB id
2bki
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.33 26.1 -1.93 -0.24 20.9 76 3 3 1 2 2 0 1  
2 2.35 3.78 26.5 -1.77 -0.48 12.8 71 2 3 3 2 2 2 0  
3 1.69 2.54 36.6 -0.39 -0.03 9.5 79 3 1 2 4 1 0 1  
4 1.85 2.00 38.1 -1.29 -0.25 12.7 77 2 3 3 2 3 2 0  
5 1.54 1.62 41.1 -2.26 -0.59 21.6 88 5 2 5 2 0 0 0  
6 1.89 1.93 62.8 -1.48 -0.32 23.6 85 7 4 6 5 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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