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Ligand clusters for UniProt code Q59310

Ligand clusters for Q59310: Exo-alpha-sialidase (Precursor) OS=Clostridium perfringens GN=nanH PE=1 SV=1

6 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
4 ligands
Representative protein: 2bf6A  
 

Structures

PDB   Schematic diagram
2bf6A    
2vk7A    
2vk5A    
2vk6A    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: DAN × 1
2-Deoxy-2,3-Dehydro-N-Acetyl-Neuraminic acid
PDB code: 2vk6(A).


 
2. Ligand: FSI × 1
5-(Acetylamino)-2,6-Anhydro-3,5-Dideoxy-3- Fluoronononic acid
PDB code: 2vk7(A).


 
3. Ligand: SIA × 1
O-Sialic acid
PDB code: 2bf6(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 2vk6(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2bf6(A), 2vk5(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2bf6(A), 2vk5(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 2bf6(A), 2vk5(A), 2vk7(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 2vk6(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 4
PDB codes: 2bf6(A), 2vk5(A), 2vk6(A), 2vk7(A).

 

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