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PDBsum entry 2ber

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Tunnel analysis for: 2ber calculated with MOLE 2.0 PDB id
2ber
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.81 11.9 -2.27 -0.40 26.0 88 3 3 3 1 0 1 0  1648 SLB A
2 1.93 25.4 -1.52 -0.27 22.6 82 2 4 3 2 4 1 0  1648 SLB A
3 1.35 28.4 -1.18 -0.34 16.1 85 2 2 2 4 0 3 0  
4 1.41 12.8 2.24 0.82 4.7 77 1 0 0 5 1 0 1  
5 1.67 8.9 -0.27 -0.37 6.7 75 1 0 0 2 0 1 0  
6 1.60 5.2 -1.23 -0.44 21.0 77 1 1 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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