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PDBsum entry 2bcv
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Pore analysis for: 2bcv calculated with  MOLE 2.0
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PDB id
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2bcv
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.12 |
1.11 |
26.8 |
-1.51 |
-0.33 |
21.0 |
86 |
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3 |
4 |
2 |
4 |
2 |
0 |
0 |
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MG 576 A TTP 580 A
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2 |
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1.63 |
1.63 |
28.7 |
-2.25 |
-0.51 |
26.1 |
89 |
6 |
1 |
2 |
1 |
0 |
0 |
0 |
TTP 580 A DT 4 P DA 5 P O2C 6 P DA 5 T
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3 |
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1.43 |
1.43 |
34.4 |
-1.31 |
-0.31 |
21.9 |
84 |
4 |
4 |
3 |
3 |
1 |
0 |
0 |
MG 576 A NA 579 A TTP 580 A DG 3 P DT 4 P DA 5 P
O2C 6 P DA 9 T DC 10 T DT 11 T DG 12 T
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4 |
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2.98 |
3.01 |
35.7 |
-1.85 |
-0.35 |
22.1 |
81 |
6 |
1 |
2 |
1 |
1 |
0 |
1 |
TTP 580 A DA 2 P DG 3 P DT 4 P DA 5 P O2C 6 P DG
3 T DA 5 T DT 8 T
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5 |
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1.16 |
1.09 |
42.3 |
-0.77 |
-0.28 |
17.0 |
83 |
2 |
4 |
2 |
6 |
2 |
0 |
0 |
MG 576 A NA 579 A TTP 580 A DG 3 P DT 4 P DA 5 P
O2C 6 P DA 9 T DC 10 T DT 11 T DG 12 T
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6 |
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1.37 |
2.25 |
42.6 |
-1.59 |
-0.20 |
22.2 |
80 |
5 |
6 |
3 |
4 |
2 |
1 |
0 |
MG 576 A NA 579 A TTP 580 A DA 5 P O2C 6 P DT 7 T
DA 9 T
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7 |
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1.43 |
1.44 |
44.0 |
-1.00 |
-0.34 |
17.4 |
82 |
4 |
1 |
2 |
3 |
1 |
0 |
0 |
TTP 580 A DG 3 P DT 4 P DA 5 P O2C 6 P DA 5 T DA
9 T DC 10 T DT 11 T DG 12 T
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8 |
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1.39 |
2.30 |
47.8 |
-0.87 |
-0.18 |
14.2 |
80 |
2 |
3 |
3 |
5 |
2 |
1 |
0 |
DG 3 P DT 4 P DA 5 P O2C 6 P DT 7 T DA 9 T DC 10
T DT 11 T DG 12 T
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9 |
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1.20 |
1.11 |
50.6 |
-1.32 |
-0.27 |
19.4 |
81 |
3 |
6 |
3 |
7 |
3 |
1 |
0 |
MG 576 A NA 579 A TTP 580 A DA 5 P O2C 6 P DT 7 T
DA 9 T
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10 |
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1.38 |
2.41 |
57.1 |
-1.44 |
-0.21 |
19.2 |
76 |
5 |
3 |
3 |
4 |
3 |
1 |
1 |
TTP 580 A DA 2 P DG 3 P DT 4 P DA 5 P O2C 6 P DA
5 T DT 7 T DT 8 T DA 9 T
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11 |
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1.47 |
1.47 |
62.4 |
-0.79 |
-0.35 |
12.3 |
79 |
4 |
1 |
2 |
4 |
2 |
0 |
1 |
TTP 580 A DA 2 P DG 3 P DT 4 P DA 5 P O2C 6 P DG
3 T DA 5 T DT 8 T DA 9 T DC 10 T DT 11 T DG 12 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program