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PDBsum entry 2bcs

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Pore analysis for: 2bcs calculated with MOLE 2.0 PDB id
2bcs
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.54 30.5 -1.63 -0.46 16.6 78 3 2 2 1 1 1 0  DC 3 D DG 4 D DG 3 T DC 4 T
2 2.94 2.96 48.8 -1.98 -0.41 26.3 74 8 2 1 1 2 0 1  PPV 901 A DC 1 P DA 2 P DG 3 P DT 4 P DA 5 P DC 6
P DG 7 P DT 8 T
3 1.20 1.20 65.5 -1.14 -0.22 18.4 81 2 2 4 6 1 3 0  DG 3 P DT 4 P DA 5 P DC 6 P DC 7 T DT 8 T DA 9 T
DC 10 T DT 11 T DG 12 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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