PDBsum entry 2bcq Go to PDB code:  Tunnel analysis for: 2bcq calculated with MOLE 2.0 PDB id 2bcq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 23.2 -0.67 -0.39 10.6 84 1 2 1 3 1 0 1  MG 713 A PPV 738 A DG 7 P 2 1.22 1.22 26.1 -1.20 -0.29 16.7 80 5 2 1 4 2 0 1  MG 713 A PPV 738 A DG 7 P 3 1.22 1.22 30.4 -1.50 -0.37 20.1 87 4 3 3 4 1 0 1  MG 713 A PPV 738 A DC 6 P DG 7 P 4 1.65 1.67 18.6 -0.54 -0.30 2.6 76 0 0 1 3 1 0 0  DG 3 P DT 4 P DA 5 P DT 11 T DG 12 T 5 1.62 1.62 19.8 -0.28 -0.50 2.4 87 0 0 1 3 0 0 0  DG 3 P DT 4 P DA 5 P DA 9 T DC 10 T DT 11 T DG 12 T 6 1.15 1.32 24.7 -0.89 -0.02 16.4 77 2 2 2 3 1 1 0  EDO 2801 A DA 5 P DC 6 P DA 9 T 7 1.16 1.21 26.1 -0.96 -0.03 17.3 77 2 2 2 3 1 1 0  EDO 2801 A DA 5 P DC 6 P DA 9 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.