PDBsum entry 2bcj Go to PDB code:  Pore analysis for: 2bcj calculated with MOLE 2.0 PDB id 2bcj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.91 3.92 37.2 -1.20 -0.26 24.5 78 4 4 1 4 1 0 0   2 2.75 4.17 45.8 -2.70 -0.55 28.3 80 4 3 3 0 1 2 0   3 2.24 3.63 48.9 -1.53 -0.36 27.1 75 4 6 1 5 1 1 0   4 1.65 1.78 66.5 -1.58 -0.28 23.8 81 6 3 2 3 1 1 0   5 1.61 1.65 91.2 -2.34 -0.41 28.0 79 9 8 4 2 4 1 0   6 1.54 1.71 91.7 -2.49 -0.50 30.2 78 9 8 4 2 2 2 0   7 1.52 1.57 104.0 -2.52 -0.56 30.2 79 9 9 5 2 1 2 0   8 1.56 1.75 106.2 -2.42 -0.49 27.6 80 9 9 5 2 3 1 0   9 1.70 1.70 80.5 -1.72 -0.54 22.7 86 7 7 5 3 1 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.