PDBsum entry 2bbt Go to PDB code:  Tunnel analysis for: 2bbt calculated with MOLE 2.0 PDB id 2bbt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.33 21.5 0.99 0.10 2.4 88 0 1 2 3 1 0 0   2 1.16 1.50 31.7 -1.20 -0.53 7.3 90 1 3 6 2 1 0 0   3 1.16 1.53 32.2 -1.71 -0.63 8.5 92 2 1 8 3 1 0 0  ATP 1 A MG 3 A 4 1.14 1.52 34.1 -1.89 -0.60 15.1 87 4 2 7 2 1 0 0   5 1.18 1.52 43.5 -1.16 -0.49 7.5 89 2 2 7 2 2 0 0  ATP 1 A MG 3 A 6 1.13 1.49 46.5 -1.54 -0.54 11.0 87 3 3 7 1 2 0 0  ATP 1 A MG 3 A 7 1.16 1.51 51.8 -1.65 -0.49 12.8 87 3 3 7 3 2 0 0   8 1.84 1.84 15.6 -2.64 -0.65 35.3 81 4 3 1 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.