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PDBsum entry 2bb0

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2bb0 calculated with MOLE 2.0 PDB id
2bb0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.58 2.24 24.3 -1.23 0.27 16.9 87 5 2 3 3 2 0 0  ACT 1501 A
2 1.57 2.09 26.8 -0.87 0.34 15.9 87 5 1 2 4 2 0 0  ACT 1501 A
3 1.62 2.34 29.1 -1.21 0.02 15.8 87 5 1 3 3 2 0 0  ACT 2501 B
4 1.59 1.60 42.6 -1.07 0.15 15.5 83 6 3 3 4 3 1 0  ACT 2501 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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