PDBsum entry 2b8k Go to PDB code:  Pore analysis for: 2b8k calculated with MOLE 2.0 PDB id 2b8k Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.15 2.19 90.1 -0.84 -0.27 17.3 84 10 6 8 9 1 2 0   2 1.62 1.77 94.1 -1.59 -0.26 26.1 81 9 8 5 8 2 1 0   3 1.19 1.42 112.2 -0.65 -0.10 16.6 84 8 7 4 17 2 3 1   4 2.15 2.26 112.7 -1.85 -0.35 24.3 82 12 5 6 4 3 4 0   5 2.59 3.42 130.0 -1.84 -0.44 21.2 90 13 8 17 5 1 1 0   6 1.67 1.69 132.1 -2.16 -0.48 22.3 85 11 11 12 3 3 6 0   7 1.81 1.86 130.9 -1.76 -0.27 19.4 86 12 4 10 5 4 3 0   8 1.32 2.44 155.3 -1.87 -0.48 21.1 81 13 11 6 5 3 4 0   9 1.41 2.02 177.8 -0.72 -0.15 15.3 84 16 8 10 19 3 3 1   10 1.67 1.78 171.8 -2.05 -0.48 25.5 86 11 9 9 7 0 1 0   11 1.69 1.84 185.3 -1.28 -0.36 23.5 83 20 13 10 17 1 2 0   12 2.01 2.13 205.7 -1.46 -0.36 22.9 86 22 12 12 15 0 1 0   13 1.50 1.53 223.3 -1.80 -0.39 22.4 85 24 11 18 12 3 6 0   14 1.50 1.54 222.6 -1.75 -0.44 21.1 87 19 14 19 18 2 2 0   15 1.70 1.87 228.8 -2.09 -0.58 26.0 86 15 16 12 10 0 1 0   16 2.07 2.18 253.1 -1.58 -0.45 23.1 86 25 18 15 16 1 1 0   17 1.26 1.29 264.6 -1.39 -0.39 20.6 87 21 20 19 22 2 2 1   18 1.69 1.67 322.9 -1.92 -0.41 24.6 86 33 17 20 18 3 4 0   19 1.22 1.24 359.8 -1.48 -0.37 20.1 85 31 18 28 28 2 2 0   20 1.20 1.33 381.4 -1.54 -0.49 21.2 86 29 29 24 20 3 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.