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PDBsum entry 2b10

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2b10 calculated with MOLE 2.0 PDB id
2b10
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.62 1.80 25.8 -0.22 -0.29 7.7 89 2 1 5 6 0 0 1  HEM 909 D
2 1.76 3.56 28.0 -2.10 -0.54 24.0 77 4 5 2 0 2 1 0  
3 1.59 2.72 29.2 -1.62 -0.43 19.1 85 3 2 3 3 2 0 0  ZNH 295 A
4 1.70 2.42 37.5 -2.53 -0.59 29.6 70 4 4 0 0 2 3 0  
5 1.59 2.47 46.1 -1.92 -0.35 20.8 83 5 3 4 3 3 0 0  ZNH 295 A
6 1.71 2.43 64.1 -2.54 -0.59 31.6 74 6 7 2 0 3 1 0  
7 1.62 1.69 69.9 -1.56 -0.46 13.0 84 6 3 8 6 2 1 1  HEM 409 B
8 1.93 2.15 76.9 -2.83 -0.54 34.4 74 11 6 2 0 3 2 0  
9 1.79 3.49 99.6 -2.57 -0.50 32.8 74 13 7 4 2 4 0 0  
10 1.21 1.48 218.3 -0.94 -0.17 16.9 80 16 7 10 16 7 4 1  ZNH 295 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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