spacer
spacer

PDBsum entry 2awn

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2awn calculated with MOLE 2.0 PDB id
2awn
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.25 30.7 -0.87 -0.38 10.7 78 3 3 2 3 1 1 0  
2 1.24 1.35 34.5 -2.50 -0.76 21.1 86 3 3 6 0 1 1 0  
3 1.24 1.34 34.8 -2.54 -0.78 20.7 88 3 4 6 0 0 1 0  
4 1.25 1.35 39.4 -0.47 -0.22 11.9 87 6 3 7 6 0 1 0  
5 1.25 1.35 45.2 -1.19 -0.39 19.0 90 6 4 7 4 0 0 0  
6 1.25 1.35 46.2 -1.15 -0.40 19.5 90 6 5 7 5 0 0 0  
7 1.24 1.34 46.3 -0.24 -0.38 9.0 84 4 3 7 8 1 1 0  
8 1.25 1.34 48.2 -0.74 -0.30 15.0 87 7 5 9 7 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer