 |
PDBsum entry 2aq5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2aq5 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2aq5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
1 pore,
coloured by radius |
|
3 pores,
coloured by radius
|
3 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.85 |
1.92 |
46.3 |
-0.89 |
-0.27 |
15.3 |
74 |
|
3 |
5 |
2 |
5 |
6 |
3 |
0 |
|
|
 |
|
2 |
 |
1.28 |
1.28 |
117.0 |
-1.80 |
-0.50 |
20.0 |
74 |
8 |
6 |
7 |
3 |
5 |
8 |
0 |
CSO 90 A CSO 332 A
|
 |
3 |
 |
1.57 |
2.62 |
155.6 |
-1.56 |
-0.66 |
14.7 |
92 |
7 |
2 |
9 |
1 |
1 |
1 |
0 |
CSO 332 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program