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PDBsum entry 2amp

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2amp calculated with MOLE 2.0 PDB id
2amp
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.04 2.26 47.7 -0.19 -0.30 5.0 83 1 3 3 5 1 0 2  I12 1001 A
2 1.56 2.45 50.7 -1.83 -0.60 17.4 92 2 4 5 2 1 0 0  
3 2.04 2.26 53.9 -0.52 -0.29 6.8 87 2 2 3 3 1 0 2  I12 1001 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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