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PDBsum entry 2aja
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Pore analysis for: 2aja calculated with  MOLE 2.0
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PDB id
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2aja
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.05 |
3.17 |
30.2 |
0.16 |
0.57 |
15.5 |
76 |
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1 |
4 |
3 |
4 |
4 |
0 |
0 |
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2 |
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1.24 |
2.24 |
32.6 |
-0.76 |
-0.07 |
22.1 |
81 |
3 |
2 |
2 |
3 |
1 |
0 |
0 |
MSE 254 A
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3 |
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1.96 |
2.13 |
78.5 |
-1.87 |
-0.28 |
23.9 |
81 |
8 |
8 |
6 |
5 |
4 |
1 |
0 |
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4 |
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1.16 |
2.01 |
155.0 |
-0.39 |
0.03 |
13.9 |
81 |
11 |
6 |
10 |
22 |
6 |
1 |
1 |
MSE 158 B MSE 193 B MSE 224 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program