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PDBsum entry 2ags

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Tunnel analysis for: 2ags calculated with MOLE 2.0 PDB id
2ags
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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17 tunnels, coloured by tunnel radius 17 tunnels, coloured by tunnel radius 17 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.35 17.2 -1.89 -0.07 24.2 84 2 4 3 2 2 0 0  700 FKD A
2 1.96 8.4 -1.05 -0.22 25.2 82 2 2 1 2 0 1 0  
3 1.58 8.7 -0.12 -0.19 14.6 83 0 2 1 2 0 1 0  
4 1.51 19.0 -1.98 -0.28 27.1 70 3 2 0 1 1 1 0  
5 1.49 19.9 -1.46 -0.27 22.1 69 2 2 0 1 1 1 0  
6 1.73 11.9 0.35 -0.20 6.0 86 1 0 1 3 0 2 0  
7 1.86 9.0 -0.98 -0.50 13.1 93 1 0 0 1 0 1 0  
8 1.87 9.3 -0.70 -0.54 9.9 91 1 0 0 1 0 1 0  
9 1.56 10.1 0.24 -0.42 6.7 95 0 2 1 2 0 0 0  
10 1.65 11.4 0.13 -0.41 9.2 97 0 2 1 1 0 0 0  
11 1.47 3.4 -0.46 -0.20 11.7 70 1 0 1 1 0 0 0  
12 2.35 9.8 -0.84 -0.10 15.4 79 1 1 1 2 0 0 0  
13 1.67 5.1 -3.01 -0.66 29.8 83 2 1 1 0 0 1 0  
14 1.57 11.5 0.28 0.24 15.9 80 1 2 0 2 3 0 0  
15 1.26 10.9 1.58 0.57 1.5 55 0 0 0 3 4 1 0  
16 1.41 6.0 0.79 -0.04 10.7 86 0 1 0 4 0 0 0  
17 1.46 3.1 -1.39 -0.59 20.9 83 1 1 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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