 |
PDBsum entry 2a6h
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2a6h calculated with MOLE 2.0
|
PDB id
|
|
|
|
2a6h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
60 pores,
coloured by radius |
 |
50 pores,
coloured by radius
|
50 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.12 |
2.88 |
32.8 |
1.20 |
0.41 |
12.2 |
79 |
 |
4 |
1 |
1 |
9 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
3.71 |
4.19 |
40.2 |
-2.81 |
-0.45 |
28.1 |
72 |
3 |
7 |
3 |
0 |
4 |
4 |
0 |
|
 |
3 |
 |
1.21 |
2.12 |
52.5 |
-1.17 |
-0.09 |
23.2 |
86 |
6 |
3 |
2 |
4 |
0 |
0 |
0 |
|
 |
4 |
 |
1.18 |
4.42 |
56.2 |
-0.45 |
-0.07 |
16.4 |
82 |
3 |
5 |
0 |
7 |
1 |
1 |
0 |
|
 |
5 |
 |
1.56 |
3.02 |
73.9 |
-0.79 |
0.00 |
19.7 |
82 |
9 |
6 |
2 |
10 |
5 |
0 |
0 |
|
 |
6 |
 |
1.33 |
2.40 |
109.4 |
-0.64 |
-0.13 |
22.3 |
77 |
10 |
14 |
4 |
16 |
3 |
1 |
0 |
|
 |
7 |
 |
2.58 |
4.96 |
110.8 |
-1.82 |
-0.37 |
26.1 |
79 |
12 |
11 |
5 |
6 |
6 |
1 |
0 |
|
 |
8 |
 |
1.17 |
1.21 |
111.8 |
-0.98 |
-0.44 |
15.6 |
83 |
4 |
7 |
1 |
5 |
1 |
3 |
0 |
|
 |
9 |
 |
1.35 |
1.36 |
115.6 |
-2.66 |
-0.68 |
29.6 |
82 |
7 |
17 |
9 |
3 |
2 |
1 |
1 |
|
 |
10 |
 |
1.30 |
1.53 |
125.0 |
-1.53 |
-0.41 |
20.8 |
87 |
18 |
10 |
9 |
13 |
0 |
5 |
0 |
|
 |
11 |
 |
1.33 |
1.35 |
144.1 |
-1.33 |
-0.52 |
18.6 |
84 |
17 |
10 |
7 |
8 |
3 |
3 |
0 |
|
 |
12 |
 |
1.49 |
1.65 |
147.3 |
-0.85 |
-0.12 |
23.4 |
78 |
17 |
10 |
4 |
13 |
2 |
1 |
0 |
|
 |
13 |
 |
1.23 |
2.15 |
143.9 |
-0.78 |
-0.21 |
17.3 |
80 |
16 |
15 |
10 |
19 |
2 |
3 |
0 |
|
 |
14 |
 |
2.70 |
4.90 |
145.3 |
-1.53 |
-0.36 |
19.1 |
82 |
18 |
12 |
11 |
10 |
5 |
4 |
0 |
|
 |
15 |
 |
1.49 |
1.66 |
155.3 |
-2.11 |
-0.42 |
30.2 |
81 |
22 |
15 |
6 |
9 |
3 |
1 |
0 |
|
 |
16 |
 |
1.48 |
1.66 |
158.6 |
-2.02 |
-0.46 |
27.9 |
83 |
20 |
14 |
6 |
8 |
3 |
2 |
0 |
|
 |
17 |
 |
1.56 |
2.72 |
168.4 |
-0.68 |
-0.09 |
13.8 |
84 |
18 |
11 |
8 |
18 |
6 |
4 |
0 |
|
 |
18 |
 |
1.26 |
1.55 |
171.1 |
-1.80 |
-0.42 |
22.4 |
80 |
15 |
10 |
8 |
8 |
3 |
5 |
0 |
|
 |
19 |
 |
1.62 |
3.94 |
176.7 |
-1.71 |
-0.26 |
24.6 |
83 |
18 |
12 |
6 |
9 |
6 |
2 |
0 |
|
 |
20 |
 |
1.38 |
2.26 |
177.6 |
-1.56 |
-0.37 |
23.5 |
76 |
13 |
16 |
3 |
10 |
5 |
7 |
0 |
|
 |
21 |
 |
1.28 |
2.22 |
208.9 |
-0.65 |
-0.03 |
20.9 |
77 |
14 |
19 |
4 |
21 |
4 |
4 |
0 |
|
 |
22 |
 |
1.25 |
1.32 |
212.2 |
-1.63 |
-0.24 |
26.5 |
79 |
18 |
13 |
7 |
16 |
5 |
1 |
0 |
|
 |
23 |
 |
1.22 |
1.21 |
210.3 |
-1.44 |
-0.18 |
23.7 |
78 |
16 |
16 |
5 |
12 |
7 |
4 |
0 |
|
 |
24 |
 |
1.46 |
2.94 |
245.2 |
-1.30 |
-0.22 |
24.6 |
79 |
29 |
19 |
6 |
18 |
5 |
3 |
0 |
|
 |
25 |
 |
1.15 |
1.29 |
264.0 |
-0.76 |
-0.18 |
19.2 |
81 |
21 |
21 |
11 |
27 |
8 |
3 |
0 |
|
 |
26 |
 |
1.57 |
2.36 |
307.9 |
-1.13 |
-0.28 |
17.4 |
85 |
30 |
20 |
16 |
23 |
8 |
5 |
0 |
|
 |
27 |
 |
1.28 |
2.02 |
35.6 |
1.61 |
0.34 |
7.6 |
75 |
2 |
3 |
0 |
11 |
0 |
1 |
0 |
|
 |
28 |
 |
1.25 |
1.49 |
42.7 |
0.36 |
0.10 |
13.4 |
83 |
5 |
2 |
0 |
11 |
0 |
1 |
0 |
|
 |
29 |
 |
2.62 |
2.71 |
45.1 |
-2.18 |
-0.42 |
28.2 |
81 |
8 |
5 |
1 |
2 |
3 |
0 |
0 |
|
 |
30 |
 |
1.14 |
3.20 |
51.5 |
2.37 |
0.74 |
3.5 |
71 |
2 |
1 |
0 |
17 |
4 |
0 |
0 |
|
 |
31 |
 |
1.10 |
1.28 |
53.8 |
-1.98 |
-0.52 |
23.4 |
80 |
7 |
4 |
4 |
1 |
1 |
3 |
0 |
|
 |
32 |
 |
1.86 |
2.15 |
58.4 |
-1.55 |
-0.60 |
15.6 |
83 |
4 |
4 |
5 |
4 |
0 |
3 |
0 |
|
 |
33 |
 |
1.85 |
2.12 |
63.5 |
-1.93 |
-0.61 |
19.1 |
84 |
5 |
4 |
4 |
4 |
0 |
3 |
0 |
|
 |
34 |
 |
1.06 |
2.65 |
74.1 |
-1.64 |
-0.50 |
21.1 |
85 |
8 |
5 |
6 |
6 |
0 |
3 |
0 |
|
 |
35 |
 |
1.32 |
1.31 |
73.9 |
-2.41 |
-0.46 |
30.9 |
79 |
10 |
8 |
0 |
3 |
3 |
0 |
0 |
|
 |
36 |
 |
1.29 |
3.24 |
74.3 |
-0.50 |
-0.18 |
18.2 |
83 |
7 |
4 |
2 |
10 |
0 |
0 |
0 |
|
 |
37 |
 |
1.08 |
2.68 |
78.8 |
-1.90 |
-0.46 |
23.4 |
86 |
8 |
5 |
5 |
6 |
0 |
3 |
0 |
|
 |
38 |
 |
1.32 |
1.32 |
80.3 |
-2.37 |
-0.60 |
31.6 |
77 |
8 |
9 |
3 |
3 |
2 |
1 |
0 |
|
 |
39 |
 |
1.25 |
1.63 |
82.9 |
-1.70 |
-0.36 |
25.3 |
79 |
9 |
8 |
3 |
6 |
3 |
3 |
0 |
|
 |
40 |
 |
1.24 |
2.15 |
91.3 |
-1.37 |
-0.29 |
23.2 |
81 |
9 |
9 |
5 |
6 |
3 |
3 |
0 |
|
 |
41 |
 |
1.35 |
1.32 |
101.4 |
-2.27 |
-0.59 |
31.2 |
81 |
11 |
12 |
4 |
5 |
2 |
1 |
0 |
|
 |
42 |
 |
1.99 |
2.00 |
111.3 |
-1.68 |
-0.44 |
25.2 |
80 |
16 |
15 |
3 |
5 |
4 |
2 |
0 |
|
 |
43 |
 |
1.95 |
2.08 |
117.6 |
-2.08 |
-0.51 |
29.5 |
85 |
15 |
16 |
3 |
7 |
3 |
1 |
0 |
|
 |
44 |
 |
1.33 |
1.32 |
138.1 |
-1.77 |
-0.44 |
26.8 |
79 |
16 |
16 |
6 |
8 |
4 |
2 |
0 |
|
 |
45 |
 |
2.27 |
5.02 |
143.8 |
-2.01 |
-0.60 |
24.1 |
79 |
12 |
16 |
5 |
3 |
4 |
7 |
0 |
|
 |
46 |
 |
1.17 |
3.03 |
151.8 |
-1.60 |
-0.41 |
24.5 |
84 |
18 |
15 |
9 |
13 |
3 |
3 |
0 |
|
 |
47 |
 |
2.28 |
5.01 |
152.2 |
-1.76 |
-0.54 |
22.3 |
80 |
12 |
17 |
6 |
3 |
4 |
7 |
0 |
|
 |
48 |
 |
1.20 |
2.30 |
163.0 |
-1.17 |
-0.33 |
22.1 |
79 |
13 |
18 |
2 |
11 |
5 |
6 |
0 |
|
 |
49 |
 |
1.99 |
2.29 |
197.3 |
-1.66 |
-0.38 |
21.8 |
81 |
20 |
18 |
11 |
11 |
5 |
7 |
0 |
MG 9002 N
|
 |
50 |
 |
1.98 |
2.24 |
302.2 |
-1.84 |
-0.45 |
23.1 |
81 |
32 |
26 |
18 |
17 |
5 |
8 |
0 |
MG 9002 N
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |