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PDBsum entry 2a6h

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Pore analysis for: 2a6h calculated with MOLE 2.0 PDB id
2a6h
Pores calculated on whole structure Pores calculated excluding ligands

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60 pores, coloured by radius 50 pores, coloured by radius 50 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 2.88 32.8 1.20 0.41 12.2 79 4 1 1 9 0 0 0  
2 3.71 4.19 40.2 -2.81 -0.45 28.1 72 3 7 3 0 4 4 0  
3 1.21 2.12 52.5 -1.17 -0.09 23.2 86 6 3 2 4 0 0 0  
4 1.18 4.42 56.2 -0.45 -0.07 16.4 82 3 5 0 7 1 1 0  
5 1.56 3.02 73.9 -0.79 0.00 19.7 82 9 6 2 10 5 0 0  
6 1.33 2.40 109.4 -0.64 -0.13 22.3 77 10 14 4 16 3 1 0  
7 2.58 4.96 110.8 -1.82 -0.37 26.1 79 12 11 5 6 6 1 0  
8 1.17 1.21 111.8 -0.98 -0.44 15.6 83 4 7 1 5 1 3 0  
9 1.35 1.36 115.6 -2.66 -0.68 29.6 82 7 17 9 3 2 1 1  
10 1.30 1.53 125.0 -1.53 -0.41 20.8 87 18 10 9 13 0 5 0  
11 1.33 1.35 144.1 -1.33 -0.52 18.6 84 17 10 7 8 3 3 0  
12 1.49 1.65 147.3 -0.85 -0.12 23.4 78 17 10 4 13 2 1 0  
13 1.23 2.15 143.9 -0.78 -0.21 17.3 80 16 15 10 19 2 3 0  
14 2.70 4.90 145.3 -1.53 -0.36 19.1 82 18 12 11 10 5 4 0  
15 1.49 1.66 155.3 -2.11 -0.42 30.2 81 22 15 6 9 3 1 0  
16 1.48 1.66 158.6 -2.02 -0.46 27.9 83 20 14 6 8 3 2 0  
17 1.56 2.72 168.4 -0.68 -0.09 13.8 84 18 11 8 18 6 4 0  
18 1.26 1.55 171.1 -1.80 -0.42 22.4 80 15 10 8 8 3 5 0  
19 1.62 3.94 176.7 -1.71 -0.26 24.6 83 18 12 6 9 6 2 0  
20 1.38 2.26 177.6 -1.56 -0.37 23.5 76 13 16 3 10 5 7 0  
21 1.28 2.22 208.9 -0.65 -0.03 20.9 77 14 19 4 21 4 4 0  
22 1.25 1.32 212.2 -1.63 -0.24 26.5 79 18 13 7 16 5 1 0  
23 1.22 1.21 210.3 -1.44 -0.18 23.7 78 16 16 5 12 7 4 0  
24 1.46 2.94 245.2 -1.30 -0.22 24.6 79 29 19 6 18 5 3 0  
25 1.15 1.29 264.0 -0.76 -0.18 19.2 81 21 21 11 27 8 3 0  
26 1.57 2.36 307.9 -1.13 -0.28 17.4 85 30 20 16 23 8 5 0  
27 1.28 2.02 35.6 1.61 0.34 7.6 75 2 3 0 11 0 1 0  
28 1.25 1.49 42.7 0.36 0.10 13.4 83 5 2 0 11 0 1 0  
29 2.62 2.71 45.1 -2.18 -0.42 28.2 81 8 5 1 2 3 0 0  
30 1.14 3.20 51.5 2.37 0.74 3.5 71 2 1 0 17 4 0 0  
31 1.10 1.28 53.8 -1.98 -0.52 23.4 80 7 4 4 1 1 3 0  
32 1.86 2.15 58.4 -1.55 -0.60 15.6 83 4 4 5 4 0 3 0  
33 1.85 2.12 63.5 -1.93 -0.61 19.1 84 5 4 4 4 0 3 0  
34 1.06 2.65 74.1 -1.64 -0.50 21.1 85 8 5 6 6 0 3 0  
35 1.32 1.31 73.9 -2.41 -0.46 30.9 79 10 8 0 3 3 0 0  
36 1.29 3.24 74.3 -0.50 -0.18 18.2 83 7 4 2 10 0 0 0  
37 1.08 2.68 78.8 -1.90 -0.46 23.4 86 8 5 5 6 0 3 0  
38 1.32 1.32 80.3 -2.37 -0.60 31.6 77 8 9 3 3 2 1 0  
39 1.25 1.63 82.9 -1.70 -0.36 25.3 79 9 8 3 6 3 3 0  
40 1.24 2.15 91.3 -1.37 -0.29 23.2 81 9 9 5 6 3 3 0  
41 1.35 1.32 101.4 -2.27 -0.59 31.2 81 11 12 4 5 2 1 0  
42 1.99 2.00 111.3 -1.68 -0.44 25.2 80 16 15 3 5 4 2 0  
43 1.95 2.08 117.6 -2.08 -0.51 29.5 85 15 16 3 7 3 1 0  
44 1.33 1.32 138.1 -1.77 -0.44 26.8 79 16 16 6 8 4 2 0  
45 2.27 5.02 143.8 -2.01 -0.60 24.1 79 12 16 5 3 4 7 0  
46 1.17 3.03 151.8 -1.60 -0.41 24.5 84 18 15 9 13 3 3 0  
47 2.28 5.01 152.2 -1.76 -0.54 22.3 80 12 17 6 3 4 7 0  
48 1.20 2.30 163.0 -1.17 -0.33 22.1 79 13 18 2 11 5 6 0  
49 1.99 2.29 197.3 -1.66 -0.38 21.8 81 20 18 11 11 5 7 0  MG 9002 N
50 1.98 2.24 302.2 -1.84 -0.45 23.1 81 32 26 18 17 5 8 0  MG 9002 N

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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