PDBsum entry 2a6d Go to PDB code:  Tunnel analysis for: 2a6d calculated with MOLE 2.0 PDB id 2a6d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 1.40 20.0 -0.33 -0.50 5.5 96 1 0 5 2 1 0 0   2 1.40 1.40 20.2 0.28 -0.39 1.8 97 0 0 5 2 1 0 0   3 1.41 1.54 16.9 -1.54 -0.37 15.6 67 2 1 1 0 2 1 0   4 1.20 2.34 20.1 -0.61 0.07 10.5 71 2 1 1 2 2 0 0   5 1.21 1.26 18.8 -0.45 -0.29 12.1 81 1 2 3 4 1 1 0   6 1.23 2.49 16.3 0.77 0.13 9.8 86 0 1 1 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.