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PDBsum entry 2a68
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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2a68 calculated with MOLE 2.0 PDB id
2a68
Pores calculated on whole structure Pores calculated excluding ligands
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46 pores, coloured by radius 57 pores, coloured by radius 57 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.51 43.5 -0.13 -0.03 15.9 84 3 2 1 10 2 1 0  
2 1.16 1.25 44.9 -1.56 -0.48 22.4 85 7 3 3 3 1 1 0  MG 9391 B
3 1.17 1.51 51.0 -0.18 -0.14 14.6 81 4 4 1 8 3 1 0  
4 1.87 2.01 69.6 -2.63 -0.70 31.1 84 10 9 5 4 0 1 0  MG 9171 C MG 9114 D
5 1.77 2.28 74.9 -2.30 -0.41 28.6 80 10 9 2 4 3 0 0  MG 9146 B MG 9190 C
6 1.17 1.27 81.4 -2.21 -0.58 25.8 79 11 7 5 5 2 1 0  MG 9391 B MG 9171 C MG 9070 D MG 9114 D
7 1.78 2.26 90.3 -2.23 -0.54 30.9 83 13 10 3 5 3 1 0  MG 9130 C MG 9190 C MG 9417 D
8 1.15 1.23 91.4 -2.41 -0.54 30.1 78 9 10 7 6 4 2 0  MG 9391 B MG 9147 D
9 1.83 2.16 92.3 -2.52 -0.58 32.6 81 12 13 4 6 3 1 0  MG 9130 C MG 9171 C MG 9190 C MG 9114 D MG 9417 D
10 1.16 1.24 94.6 -2.07 -0.46 29.4 81 12 10 3 8 4 2 0  MG 9391 B MG 9130 C MG 9190 C MG 9417 D
11 2.85 2.89 96.5 -1.87 -0.54 26.6 81 10 7 4 5 3 3 0  MG 9098 C MG 9204 C MG 9406 C MG 9457 C MG 9006 D
MG 9093 D MG 9096 D MG 9433 D MG 9464 D MG 9519 D
12 1.20 1.48 101.1 -1.38 -0.37 20.7 81 7 8 4 8 3 1 0  MG 9038 D
13 2.58 2.86 110.8 -2.55 -0.57 31.2 79 11 14 9 6 4 2 0  MG 9146 B MG 9391 B MG 9147 D
14 1.35 1.42 113.6 -0.89 -0.17 18.9 80 8 1 2 10 1 2 0  MG 9177 C MG 9462 C
15 2.68 3.12 115.2 -2.76 -0.62 32.0 80 11 17 10 6 3 1 0  MG 9146 B MG 9171 C MG 9114 D MG 9147 D
16 1.87 2.02 114.7 -2.09 -0.60 27.9 83 17 13 6 5 1 2 0  RBT 8001 C MG 9088 C MG 9171 C MG 9114 D MG 9435 F
17 1.23 1.31 127.9 -0.72 -0.12 18.9 80 12 4 4 17 3 2 0  MG 9391 B MG 9193 C MG 9421 F MG 9547 F
18 1.26 1.35 126.6 -1.91 -0.53 25.6 79 18 11 6 6 3 2 0  MG 9391 B RBT 8001 C MG 9088 C MG 9171 C MG 9070
D MG 9114 D MG 9435 F
19 1.37 3.10 128.5 -2.07 -0.33 27.0 77 10 10 3 6 3 2 0  MG 9182 D MG 9393 D MG 9452 D
20 2.02 2.23 137.5 -2.09 -0.51 29.8 81 19 17 5 8 4 2 0  RBT 8001 C MG 9088 C MG 9130 C MG 9171 C MG 9190
C MG 9114 D MG 9417 D MG 9435 F
21 1.37 3.17 145.7 -1.74 -0.27 27.9 76 14 11 1 12 3 2 0  MG 9101 B MG 9190 C MG 9182 D MG 9393 D MG 9452 D
22 2.58 2.71 160.3 -2.38 -0.58 29.7 80 18 21 11 7 4 2 0  MG 9146 B RBT 8001 C MG 9088 C MG 9171 C MG 9114
D MG 9147 D MG 9435 F
23 1.27 1.49 168.1 -1.42 -0.19 27.4 78 19 13 4 18 6 2 0  MG 9130 C MG 9190 C MG 9193 C MG 9070 D MG 9114 D
MG 9417 D MG 9421 F MG 9547 F
24 1.46 1.67 184.8 -1.79 -0.40 26.3 81 20 16 7 9 3 2 0  MG 9059 D MG 9447 D MG 9410 F
25 1.40 1.42 194.3 -1.72 -0.52 25.3 80 15 21 8 12 2 1 0  MG 9146 B MG 9395 B MG 9399 C MG 9444 C MG 9077 D
MG 9184 E MG 9438 E MG 9421 F
26 1.94 1.94 200.9 -2.31 -0.55 29.1 80 18 21 10 9 4 3 0  MG 9146 B MG 9199 B MG 9038 D MG 9147 D
27 1.19 1.41 240.3 -0.71 -0.11 19.3 78 18 14 5 28 7 5 0  RBT 8001 C MG 9083 C MG 9098 C MG 9204 C MG 9409
C MG 9422 C MG 9457 C MG 9462 C MG 9006 D MG 9423
D MG 9433 D MG 9519 D MG 9421 F MG 9435 F
28 2.91 3.14 52.1 -1.59 -0.23 25.3 77 7 7 0 3 2 1 0  MG 9348 M
29 1.22 1.36 64.7 -0.45 -0.24 14.9 78 5 6 2 7 3 3 0  
30 1.70 1.67 79.0 -1.98 -0.51 28.3 84 10 8 5 6 1 1 0  MG 9234 L
31 1.50 2.69 85.8 -1.02 -0.01 20.7 80 10 9 1 9 6 1 0  MG 9229 M MG 9268 M
32 2.89 3.12 90.9 -2.08 -0.42 25.1 83 17 12 7 7 4 3 0  RBT 8002 M MG 9325 M MG 9334 M MG 9245 N MG 9314
N MG 9275 P
33 1.78 1.85 114.4 -2.04 -0.50 28.0 80 17 17 5 8 3 2 0  MG 9495 K MG 9325 M MG 9508 N
34 2.60 2.82 111.4 -2.16 -0.52 24.0 85 17 10 13 9 2 4 0  RBT 8002 M MG 9334 M MG 9382 M MG 9245 N MG 9247
N MG 9270 N MG 9307 N MG 9314 N MG 9352 N MG 9365
N
35 1.72 1.91 122.0 -1.82 -0.41 24.9 84 18 13 9 10 3 4 0  RBT 8002 M MG 9325 M MG 9334 M MG 9245 N MG 9301
N MG 9314 N MG 9275 P MG 9536 P
36 1.42 2.68 127.8 -0.20 0.10 14.6 85 10 8 10 21 9 0 0  RBT 8002 M MG 9229 M MG 9268 M MG 9325 M MG 9372
M MG 9275 P
37 2.16 2.34 131.7 -1.96 -0.47 25.1 83 26 15 13 10 3 4 0  MG 9495 K MG 9234 L RBT 8002 M MG 9325 M MG 9334
M MG 9245 N MG 9314 N MG 9508 N MG 9275 P
38 1.54 2.80 133.6 -0.95 -0.07 21.6 82 14 12 3 13 8 1 0  MG 9229 M MG 9268 M MG 9472 M MG 9489 M
39 1.39 2.63 133.2 -1.37 -0.17 21.3 83 17 12 9 13 7 4 0  RBT 8002 M MG 9229 M MG 9268 M MG 9325 M MG 9334
M MG 9245 N MG 9314 N MG 9552 N MG 9275 P
40 1.67 1.71 132.1 -1.97 -0.54 27.5 80 16 9 5 6 3 1 0  MG 9495 K MG 9497 M MG 9294 N MG 9508 N
41 3.01 3.15 136.9 -1.63 -0.35 24.2 84 21 14 8 10 5 3 0  RBT 8002 M MG 9325 M MG 9334 M MG 9472 M MG 9489
M MG 9245 N MG 9314 N MG 9275 P
42 1.70 1.77 141.3 -1.69 -0.56 27.0 83 10 16 4 8 0 1 0  MG 9234 L MG 9482 N MG 9209 O
43 1.46 1.47 148.5 -1.08 -0.31 19.6 83 16 14 14 19 6 1 0  RBT 8002 M MG 9325 M MG 9372 M MG 9508 N MG 9275 P
44 1.42 2.68 150.8 -1.08 -0.06 22.8 82 19 11 7 17 8 2 0  RBT 8002 M MG 9229 M MG 9268 M MG 9325 M MG 9334
M MG 9382 M MG 9247 N MG 9270 N MG 9307 N MG 9352
N MG 9365 N MG 9275 P
45 1.59 1.60 153.9 -2.01 -0.53 25.3 82 23 18 13 11 4 5 0  MG 9495 K RBT 8002 M MG 9325 M MG 9334 M MG 9245
N MG 9314 N MG 9508 N MG 9552 N MG 9275 P
46 1.59 1.60 161.2 -1.66 -0.41 26.5 81 21 19 6 12 5 2 0  MG 9495 K MG 9325 M MG 9472 M MG 9489 M MG 9508 N
47 1.68 1.70 171.5 -1.76 -0.43 26.3 81 25 17 11 15 5 3 0  MG 9495 K RBT 8002 M MG 9325 M MG 9334 M MG 9382
M MG 9247 N MG 9270 N MG 9307 N MG 9352 N MG 9365
N MG 9508 N MG 9275 P
48 1.46 2.54 174.5 -1.42 -0.42 21.0 80 12 15 11 15 4 10 0  MG 9383 M MG 9504 N MG 9552 N MG 9555 N
49 1.38 1.37 183.0 -1.47 -0.47 19.9 82 12 15 12 14 3 10 0  MG 9383 M MG 9504 N MG 9552 N MG 9555 N
50 1.28 1.28 203.6 -1.24 -0.37 21.1 81 17 19 10 15 6 7 0  MG 9383 M MG 9270 N MG 9307 N MG 9352 N MG 9365 N
MG 9504 N MG 9555 N
51 1.30 1.30 214.2 -0.46 -0.15 16.5 81 14 18 12 27 9 5 0  MG 9372 M MG 9383 M MG 9504 N MG 9555 N
52 1.29 1.29 218.6 -1.10 -0.26 21.0 80 21 21 6 20 9 6 0  RBT 8002 M MG 9325 M MG 9334 M MG 9382 M MG 9383
M MG 9247 N MG 9504 N MG 9555 N MG 9275 P
53 1.31 1.33 227.4 -1.08 -0.31 20.8 80 19 20 7 15 7 6 0  MG 9383 M MG 9472 M MG 9489 M MG 9504 N MG 9555 N
54 1.30 1.30 238.5 -0.74 -0.11 20.2 80 23 21 5 25 11 5 0  RBT 8002 M MG 9229 M MG 9268 M MG 9325 M MG 9334
M MG 9382 M MG 9383 M MG 9247 N MG 9504 N MG 9555
N MG 9275 P
55 1.40 2.12 241.1 -1.06 -0.25 22.3 80 22 23 7 24 9 7 0  RBT 8002 M MG 9325 M MG 9334 M MG 9382 M MG 9383
M MG 9247 N MG 9301 N MG 9504 N MG 9555 N MG 9275
P MG 9536 P
56 1.28 1.28 259.4 -1.35 -0.35 22.7 81 30 25 12 23 8 7 0  MG 9234 L RBT 8002 M MG 9325 M MG 9334 M MG 9382
M MG 9383 M MG 9247 N MG 9504 N MG 9508 N MG 9555
N MG 9275 P
57 1.39 2.66 276.4 -1.38 -0.32 24.6 78 30 28 8 24 12 6 0  MG 9495 K RBT 8002 M MG 9254 M MG 9276 M MG 9309
M MG 9325 M MG 9334 M MG 9382 M MG 9383 M MG 9535
M MG 9247 N MG 9504 N MG 9508 N MG 9555 N MG 9275
P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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