spacer
spacer

PDBsum entry 2a02

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 2a02 calculated with MOLE 2.0 PDB id
2a02
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.44 25.9 1.51 0.19 1.5 69 0 0 2 8 1 0 0  
2 1.23 1.27 26.3 2.58 0.69 0.9 68 0 0 1 12 1 0 0  
3 1.08 1.42 26.4 1.49 0.19 1.5 72 0 0 2 8 1 0 0  
4 1.24 1.24 26.8 2.63 0.72 0.8 71 0 0 1 12 1 0 0  
5 1.24 1.24 29.3 2.18 0.64 3.0 72 0 1 2 11 2 0 0  
6 1.23 1.25 29.8 2.21 0.63 2.7 74 0 1 2 11 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer