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PDBsum entry 2fkp

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protein Protein-protein interface(s) links
Isomerase PDB id
2fkp
Jmol PyMol
Contents
Protein chains
360 a.a. *
Waters ×891
* Residue conservation analysis
PDB id:
2fkp
Name: Isomerase
Title: The mutant g127c-t313c of deinococcus radiodurans n- acylamino acid racemase
Structure: N-acylamino acid racemase. Chain: a, b, c, d. Engineered: yes. Mutation: yes
Source: Deinococcus radiodurans. Organism_taxid: 1299. Strain: ccrc 12827. Expressed in: escherichia coli. Expression_system_taxid: 562.
Biol. unit: Octamer (from PDB file)
Resolution:
2.00Å     R-factor:   0.184     R-free:   0.227
Authors: W.C.Wang,W.C.Chiu
Key ref: W.C.Wang and w.c.chiu Enhanced thermoactivity in covalently cross-Linked n-Carbamoyl d-Amino acid amidohydrolase but not in n-Acylamino acid racemase that has induced fit movements upon substrate binding. To be published, .
Date:
05-Jan-06     Release date:   24-Jan-06    
Supersedes: 2bah
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9RYA6  (Q9RYA6_DEIRA) -  o-succinylbenzoate synthase
Seq:
Struc:
375 a.a.
360 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.5.1.1.10  - Amino-acid racemase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: An L-amino acid = a D-amino acid
L-amino acid
= D-amino acid
      Cofactor: Pyridoxal 5'-phosphate
Pyridoxal 5'-phosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     menaquinone biosynthetic process   1 term 
  Biochemical function     lyase activity     4 terms  

 

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