spacer
spacer

PDBsum entry 1zxc

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1zxc calculated with MOLE 2.0 PDB id
1zxc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.22 3.75 23.2 -2.14 -0.82 17.5 81 1 3 2 1 1 0 0  
2 1.24 1.32 16.5 -0.95 -0.58 11.9 82 4 0 2 1 1 0 0  
3 1.28 1.55 16.7 -1.57 -0.51 22.4 65 3 1 0 1 1 0 1  
4 1.89 2.05 15.5 -0.20 -0.19 14.4 87 2 1 0 7 0 0 0  IH6 478 B
5 2.06 2.22 16.1 0.51 -0.02 8.2 82 1 0 0 7 1 0 0  IH6 478 A
6 1.23 1.23 18.1 0.53 -0.08 9.8 81 4 2 0 4 0 0 0  IH6 478 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer