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PDBsum entry 1ztt

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Top Page protein dna_rna ligands tunnels links
Tunnel analysis for: 1ztt calculated with MOLE 2.0 PDB id
1ztt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 15.2 -1.53 -0.05 16.5 68 4 2 1 0 2 2 0  
2 1.46 3.06 16.0 -1.18 0.28 23.1 68 4 1 1 3 3 1 0  
3 1.63 1.68 16.5 -2.40 -0.22 24.4 70 4 1 2 0 2 2 0  
4 1.62 1.69 17.3 -2.16 -0.28 16.8 70 4 2 2 0 2 2 0  
5 1.47 3.05 17.5 -0.82 0.29 16.1 68 4 2 1 3 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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