PDBsum entry 1zrf Go to PDB code:  Pore analysis for: 1zrf calculated with MOLE 2.0 PDB id 1zrf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.37 27.9 -1.04 -0.73 11.7 87 2 0 1 0 0 0 0  DA 2 W DA 3 W DT 4 W DT -2 X DT -1 X DT 1 X 2 1.40 1.67 30.3 0.22 -0.15 9.4 88 2 2 5 8 0 0 0  CMP 1622 B 3 1.45 1.45 46.3 -1.85 -0.53 20.4 82 5 1 3 2 1 0 0  DA 2 Y DA 3 Y DT 4 Y DG 5 Y DC 6 Y DG 7 Y DT 9 Y DT -2 Z DT - 1 Z DT 1 Z DT 2 Z DT 3 Z DA 4 Z DC 5 Z DG 6 Z DC 7 Z 4 1.48 1.48 61.1 -1.54 -0.64 18.6 87 3 1 0 1 0 0 0  CMP 2622 A DG 6 X DC 7 X DT 8 X DA 9 X DC 6 Y DG 7 Y DA 8 Y DT 9 Y DT 1 Z DT 2 Z DT 3 Z DA 4 Z DC 5 Z DG 6 Z DC 7 Z DG 10 Z DA 11 Z 5 1.42 1.42 63.9 -1.25 -0.71 14.8 88 3 2 0 1 0 0 0  DA 9 X DG 10 X DA 11 X DT 12 X DC 6 Y DG 7 Y DA 8 Y DT 9 Y DT 1 Z DT 2 Z DT 3 Z DA 4 Z DC 5 Z DG 6 Z DC 7 Z DT 8 Z DA 9 Z DG 10 Z DA 11 Z 6 2.19 2.19 72.7 -2.10 -0.61 22.0 80 9 4 5 2 2 0 0  CMP 3622 B DA 11 X DT 12 X DA 2 Y DA 3 Y DT - 2 Z DT 8 Z DA 9 Z 7 1.45 1.45 97.7 -2.15 -0.72 20.8 82 7 4 7 1 0 1 0  DA 2 W DA 3 W DT 4 W DG 5 W DC 6 W DT -2 X DT - 1 X DT 1 X DT 2 X 8 1.44 1.44 165.5 -1.96 -0.65 21.0 84 10 8 8 5 0 3 0  DA 2 W DA 3 W DT 4 W DT -2 X DT -1 X DT 1 X Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.