PDBsum entry 1zpb Go to PDB code:  Tunnel analysis for: 1zpb calculated with MOLE 2.0 PDB id 1zpb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.49 29.1 0.04 -0.23 9.9 83 2 2 0 5 2 1 0   2 1.27 1.35 15.4 -0.86 -0.41 8.3 71 1 1 0 1 2 0 0  995 301 A 3 1.36 1.36 17.8 -1.32 -0.74 16.2 94 2 1 1 0 0 0 0  995 301 A 4 1.36 1.36 18.1 -1.25 -0.69 15.0 65 1 2 0 0 1 0 0  995 301 A 5 1.35 1.57 16.7 -0.48 -0.24 5.8 79 2 0 1 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.