PDBsum entry 1zml Go to PDB code:  Tunnel analysis for: 1zml calculated with MOLE 2.0 PDB id 1zml Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.30 21.8 0.12 -0.28 6.1 73 2 2 0 5 2 1 1  SO4 1003 A 2 1.28 1.48 15.2 -1.01 -0.52 11.3 79 2 1 1 1 2 0 0  412 1001 A 3 1.48 1.48 15.5 -0.84 -0.79 10.7 70 1 1 0 1 0 0 0  412 1001 A 4 1.47 1.47 17.6 -1.20 -0.73 14.7 78 2 2 1 0 1 0 0  412 1001 A 5 1.41 1.41 15.5 -0.39 -0.30 7.1 89 2 0 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.