spacer
spacer

PDBsum entry 1zin

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1zin calculated with MOLE 2.0 PDB id
1zin
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.43 31.8 -1.92 -0.52 24.9 79 6 2 0 2 1 2 0  AP5 218 A
2 1.15 1.59 35.5 -1.17 -0.30 17.9 79 5 1 2 4 2 2 0  AP5 218 A
3 1.16 1.43 42.3 -1.39 -0.28 20.6 80 8 1 0 3 2 2 0  AP5 218 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer