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PDBsum entry 1zgn

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1zgn calculated with MOLE 2.0 PDB id
1zgn
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 14 tunnels, coloured by tunnel radius 14 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.93 11.9 -1.94 -0.24 11.6 69 1 1 2 0 3 1 0  
2 1.80 17.8 -1.44 -0.54 9.5 69 2 0 1 1 2 1 0  
3 2.00 21.3 -2.97 -0.72 32.2 85 2 5 4 1 0 0 1  1221 GSH A
4 1.50 22.4 -3.14 -0.79 33.4 86 2 5 5 1 0 0 1  2221 GSH B
5 1.49 31.0 -2.45 -0.39 24.8 81 1 5 4 2 3 0 0  1221 GSH A,1222 FE A,1223 NO A,1224 NO A
6 2.03 36.7 -1.93 -0.14 21.0 79 1 5 6 2 4 0 0  2221 GSH B,2222 FE B,2223 NO B,2224 NO B
7 1.40 45.5 -1.63 -0.15 23.2 83 3 6 6 6 4 0 0  2221 GSH B,2222 FE B,2223 NO B,2224 NO B
8 1.48 46.1 -1.22 0.04 20.8 82 3 6 5 6 4 0 0  1221 GSH A,1222 FE A,1223 NO A,1224 NO A
9 1.79 8.2 -3.05 0.07 30.6 66 3 0 0 0 2 0 0  
10 1.79 9.8 -2.75 -0.29 25.4 72 2 0 2 0 2 0 0  
11 1.49 11.8 -1.10 -0.02 22.2 77 2 2 0 3 1 0 0  
12 1.44 15.2 -1.04 0.00 22.6 72 1 2 0 3 2 0 0  
13 1.50 6.3 -0.77 -0.75 3.0 99 0 0 2 1 0 1 0  
14 1.42 7.8 -1.76 -0.82 15.6 89 1 1 2 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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