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PDBsum entry 1zgn

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1zgn PDB id
1zgn
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 9130.22 10.88 69.06 2 12.55 1 21.97 1 14 14 38 31 14 19 4 GSH 1221[A], GSH 2221[B] (40 atoms)
2 839.11 0.00 66.35 4 8.43 2 7.64 3 4 2 4 4 2 6 0  
3 757.69 0.00 63.11 7 6.78 5 7.01 4 3 2 4 4 4 3 0 MES 1220[A] (10 atoms)
4 574.59 0.00 65.02 6 5.87 8 6.24 7 2 1 4 7 1 2 0  
5 484.73 0.00 65.58 5 7.52 3 8.80 2 1 1 2 7 1 1 0  
6 509.62 0.00 58.33 10 5.33 9 6.13 8 2 2 3 2 2 1 0 MES 2220[B] (12 atoms)
7 376.31 0.00 69.05 3 5.95 7 6.35 6 1 1 4 3 1 1 0  
8 362.81 0.00 69.42 1 7.28 4 6.77 5 1 1 4 3 1 1 0  
9 375.47 0.00 62.65 8 2.55 10 5.65 10 1 2 5 4 1 0 0  
10 307.12 0.00 58.96 9 6.28 6 6.04 9 2 0 0 6 1 3 1  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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