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PDBsum entry 1zdp

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Cleft analysis for: 1zdp PDB id
1zdp
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2165.91 2.12 62.95 5 10.13 1 10.05 1 7 6 9 9 8 4 0 TIO 1006[E] (17 atoms)
2 1021.78 0.00 66.21 3 8.72 2 8.23 4 4 5 5 7 3 3 0  
3 783.00 0.00 57.21 8 7.34 4 8.42 3 1 5 3 5 1 3 0  
4 747.14 0.00 55.94 9 6.54 6 7.41 7 4 1 5 2 2 1 0  
5 812.53 0.00 61.80 6 7.65 3 6.91 8 2 3 3 4 4 7 0  
6 602.44 0.00 57.25 7 6.44 7 8.08 5 1 3 1 5 4 0 0  
7 407.11 0.00 68.50 2 7.17 5 8.91 2 3 1 2 2 3 1 0  
8 463.64 0.00 55.68 10 4.90 9 6.33 9 1 1 5 2 2 3 0  
9 218.95 0.00 65.33 4 4.21 10 5.86 10 0 1 6 1 0 0 0  
10 220.64 0.00 70.04 1 5.24 8 7.55 6 1 1 3 0 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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