spacer
spacer

PDBsum entry 1z0h

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 1z0h calculated with MOLE 2.0 PDB id
1z0h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.22 20.8 -0.57 -0.16 10.9 71 0 2 2 3 5 0 0  
2 1.12 1.55 21.3 -0.51 -0.48 12.4 60 3 4 3 1 6 1 1  
3 1.13 1.23 23.8 -0.57 -0.07 10.5 68 0 2 2 3 6 0 0  
4 1.12 1.54 24.2 -0.59 -0.40 12.1 62 3 6 4 1 7 1 1  
5 1.11 1.54 30.5 -0.87 -0.30 14.0 65 4 2 6 1 11 1 1  
6 1.11 1.54 38.1 -0.80 -0.26 11.3 69 4 3 7 2 8 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer