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PDBsum entry 1yz4

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1yz4 PDB id
1yz4
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 7535.95 3.45 67.31 3 12.84 2 17.63 1 20 15 23 24 11 14 4 SO4 159[B] (5 atoms)
2 2184.47 0.00 60.40 9 9.23 5 8.57 4 7 5 9 8 4 7 0  
3 1701.84 0.00 63.16 6 9.50 4 9.60 2 5 1 8 10 1 7 0  
4 747.56 0.00 60.65 8 8.45 6 7.53 6 3 3 4 4 0 3 0  
5 477.98 0.00 58.63 10 7.23 8 6.98 7 1 1 2 5 0 1 0  
6 560.67 0.00 61.67 7 6.91 10 8.46 5 2 3 3 2 2 3 0  
7 665.30 0.00 72.79 2 10.22 3 8.86 3 5 1 3 3 3 2 0 SO4 160[B] (5 atoms)
8 546.75 0.00 78.67 1 13.99 1 0.00 10 3 0 3 4 3 1 0  
9 341.30 0.00 64.61 4 7.05 9 6.59 8 3 2 0 3 0 1 0  
10 381.80 0.00 64.48 5 8.12 7 5.58 9 0 2 3 2 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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